| analysis |
Additional analysis functions that are not part of the core Covasim workflow, |
| base |
The v3 contact layers (cv.Layer, now a Starsim network, and cv.Contacts), and the v3 |
| data.loaders |
Load data |
| defaults |
Set the defaults across each of the different files. |
| immunity |
Variants and immunity for Covasim on the Starsim base. |
| interventions |
Specify the core interventions available in Covasim: testing, contact tracing, vaccination, |
| misc |
Miscellaneous functions that do not belong anywhere else |
| parameters |
Set the parameters for Covasim. |
| people |
Defines the People class. |
| plotting |
Core plotting functions for simulations, multisims, and scenarios. |
| population |
Defines functions for making contact edge lists, e.g. for custom layers. |
| requirements |
Check that correct versions of each library are installed, and print warnings |
| run |
Functions and classes for running multiple Covasim runs. |
| settings |
Define options for Covasim, mostly plotting and Numba options. All options should |
| sim |
Defines the Sim class for Covasim on the Starsim base. |
| utils |
Numerical utilities for Covasim: sampling, random numbers, and array indexing helpers. |